Insertion junction: CLIP2.056915_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056915
Chromosome:chromosome 10
Location:3524960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444900 MFT4,MAE4 (1 of 11) K03327 - multidrug resistance protein, MATE family (TC.MATE, SLC47A, norM, mdtK, dinF); MATE efflux family protein 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGGAGCCTGGACTCTGAGCTTGGAGCCTGGATTATTGCGCAACATTCG
Internal bar code:CGATTCTATAGAGCGTGAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTGCCCGGCTTCAATCAA
Suggested primer 2:AAGTCTCCATGGCTGTCACG