Insertion junction: CLIP2.056918_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056918
Chromosome:chromosome 3
Location:2313907
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g157900 (1 of 1) PTHR18937//PTHR18937:SF162 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACGCGCCTCGCCACCATCGCGCAGGCTCATCATCGCCTCCAGCGCCT
Internal bar code:AAGGGCGTTGGCGCACGAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:650
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CATAGGGTTCATTGCTGCGC
Suggested primer 2:ATGAGTGGCAGTGTGGGATG