Insertion junction: CLIP2.056920_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.056920
Chromosome:chromosome 14
Location:2933536
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g627400 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCTGAGAGTGACCTGGCGTGGCGGCTCAAGAGAGAGCGAGCAGGGTCG
Internal bar code:AGAGGCGGAATTGGTGCCCCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1913
LEAP-Seq percent confirming:61.6667
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:TGACACTGAAGAGCACGGTC
Suggested primer 2:CTTGCATGTTTGACCGGCAA