Insertion junction: CLIP2.056921_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056921
Chromosome:chromosome 5
Location:2688291
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre36.g759597 (1 of 2) IPR001841//IPR013083//IPR024766 - Zinc finger, RING-type // Zinc finger, RING/FYVE/PHD-type // Zinc finger, RING-H2-type 3'UTR
Cre36.g759647 (1 of 4) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCTATGGCTGCACCCTGCGGGACTTCACCCACGTCGCTTACGGTAGT
Internal bar code:AGGGACTGCTTGCGCGCTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:898
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGAGTGTGCAGTGTACGGT
Suggested primer 2:ATGCTGGAGTGTGGTGATGG