Insertion junction: CLIP2.056922_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056922
Chromosome:chromosome 1
Location:3316594
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g021400 SPL13 Pre-mRNA splicing factor; (1 of 1) PTHR16196//PTHR16196:SF0 - CELL CYCLE CONTROL PROTEIN CWF25 // PRE-MRNA-SPLICING FACTOR CWC25 HOMOLOG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCACCAGCACCTCTGGCCGCAAACGCTCTTCCCCACCACCCGAAAGTT
Internal bar code:GTATCTTTGTCTATAACAATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:391
LEAP-Seq percent confirming:86.4865
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAGGAGTACAAGACCGGC
Suggested primer 2:AAGCTTTGCGGTAGAGCTGT