Insertion junction: CLIP2.056923_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056923
Chromosome:chromosome 2
Location:4681297
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g107800 CNK9 NimA-related protein kinase; (1 of 15) K08857 - NIMA (never in mitosis gene a)-related kinase [EC:2.7.11.1] (NEK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACACATCGGAAAGTCTAGTCTTGCGAGGACCATTGCAGGCGCGTGGC
Internal bar code:TTAGTAGCAATATGTGAGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2064
LEAP-Seq percent confirming:70.2128
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCATATGCGTGCTTCAAGCC
Suggested primer 2:CCTACCTTGCTTCCCACAGG