Insertion junction: CLIP2.056925_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056925
Chromosome:plastome
Location:119429
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802312 psaB,ChreCp048,2717038 photosystem I P700 apoprotein A2; (1 of 1) K02690 - photosystem I P700 chlorophyll a apoprotein A2 (psaB) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGATTCTGGAATAGCTACGTGTACTAAGTGACCTGTCCATGCTAAA
Internal bar code:TTGTCTAGCGTCTCTGACTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:87
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTAGCATGGCAAGGTA
Suggested primer 2:AGCTTTACCGTGAGCAGCTT