Insertion junction: CLIP2.056935_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056935
Chromosome:plastome
Location:23962
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802274 2717055,ChreCp012,rpl2 50S ribosomal protein L2; (1 of 2) IPR005880 - Ribosomal protein L2, bacterial/organellar-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACCGTAATGCTCGCATTGCTTTACTTCGTTATGAAGATGGTGAAAAACG
Internal bar code:ATATGAGGTCCCACCCTGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:295
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGTGTAACTGGACGGCT
Suggested primer 2:AGGTGCCAATGCGTAGTTGA