Insertion junction: CLIP2.056940_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056940
Chromosome:chromosome 7
Location:887895
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g318651 AOF4 (1 of 1) 1.5.3.16 - Spermine oxidase / SMO; Flavin-containing amine oxidase 5'UTR
Cre07.g318702 (1 of 1) K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAAAACCCGATTTTCACGAGGACTCTTCTGCAGCGTTACCTTAGCTA
Internal bar code:ACGAGAAATAGGGTAATTCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1567
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGAAGCGGACCGAGGTAA
Suggested primer 2:GGCCTCTAGGAAATCGTCGG