Insertion junction: CLIP2.056941_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.056941
Chromosome:chromosome 3
Location:2489250
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g159300 (1 of 2) PF05255 - Uncharacterised protein family (UPF0220) (UPF0220) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTAGTGTGGAGTTGATGCTAGCGCGAGCTGATGCCACTGGCGGCGTCG
Internal bar code:AGGTACTCTAGTGGGCTCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3561
LEAP-Seq percent confirming:99.4286
LEAP-Seq n confirming:174
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:175

Suggested primers for confirmation by PCR

Suggested primer 1:AGGCTGATACCAGAGAGGCA
Suggested primer 2:ATTGTCTGGCTGGAGCTCAC