Insertion junction: CLIP2.056944_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.056944
Chromosome:chromosome 12
Location:2024571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g510550 (1 of 2) PTHR12197//PTHR12197:SF145 - SET AND MYND DOMAIN CONTAINING // SET DOMAIN-CONTAINING PROTEIN 3'UTR
Cre12.g510600 STK11,STPK11 Serine/threonine protein kinase; (1 of 1) 2.7.11.1//2.7.11.21 - Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Polo kinase / Polo-like kinase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCGATTTGAACCATTCACGCATTGCATTTGTGCAAAGCTCAATCTTGC
Internal bar code:CAGTCGTAGTAATGGGTGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1261
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CCTACAGGTCGAGTCTGGGA
Suggested primer 2:CGCAAAATACACGCTAGGCC