Insertion junction: CLIP2.056950_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056950
Chromosome:chromosome 10
Location:5507107
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g457950 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTGTGCTTACAAGGTACTTGTCAGGTGGGCTCTTGCACCTTGCCTGG
Internal bar code:AAAGTTTGATAGGTTGTCCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3519
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:ACCATATTTCCCGCGTGGTT
Suggested primer 2:CATCCATAGCGCCTCCACAT