Insertion junction: CLIP2.056954_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.056954
Chromosome:chromosome 16
Location:3896333
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g689100 PUS6 (1 of 2) 5.4.99.23 - 23S rRNA pseudouridine(1911/1915/1917) synthase; RNA pseudouridine synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGGCAGGCTCATGCGGTTGGGATGCGCAAGGGGACTTGACGCAGTCA
Internal bar code:TCTATAAGTCATCGCGAATTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1012
LEAP-Seq percent confirming:88.3721
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CAATACCCGCAGACCCACTT
Suggested primer 2:GGAGGCCAGGTGAGTTTACC