Insertion junction: CLIP2.056959_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056959
Chromosome:chromosome 7
Location:2155661
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre07.g326700 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTTCTTACAAGTGATATGTCCATGAAGGGGCCAAGGCACTTTTCGGCC
Internal bar code:AAAGGATAAGGCACCCTCGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:447
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TCCATGGACCAAGGAAACCG
Suggested primer 2:AGCAGCAGCAGATCCGTATC