Insertion junction: CLIP2.056968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.056968
Chromosome:chromosome 9
Location:2608408
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g392250 OTU5 (1 of 2) IPR000104//IPR003323 - Antifreeze protein, type I // OTU domain; OTU-like cysteine protease 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAGAGCGCCGCGCGGTACTGTGGCCCTGCGGCGCCCCTGGCTGTCGGT
Internal bar code:GCAGCTCTCCAATTAACTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3345
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGGTGTGTCAGAAGCAC
Suggested primer 2:ACAGGGTGCACTGAAGACTG