Insertion junction: CLIP2.056971_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056971
Chromosome:chromosome 9
Location:3573799
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g396661 DUO3,DIV39 (1 of 2) IPR000104//IPR001005//IPR009057 - Antifreeze protein, type I // SANT/Myb domain // Homeodomain-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCCCTGCGGGTGCTCCTGCGGTTCGTACTCTTGCCGGTCGAGCTGCTG
Internal bar code:GGTGAGAGAAGCCTAACCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGCGATGCGGAAGATGA
Suggested primer 2:CGTCATCATCTCCGCATCCA