Insertion junction: CLIP2.056989_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.056989
Chromosome:chromosome 14
Location:3814455
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre14.g632300 HDA6 (1 of 2) PTHR10625//PTHR10625:SF131 - HISTONE DEACETYLASE // SUBFAMILY NOT NAMED; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGCTAAACTAGCGGAGCACAGGCATAGGCGTTAGTTGCAGGGGGTA
Internal bar code:TGGGTGTCGCGTCAGGAAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:481
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGTACGGACAGCGTGAAGAC
Suggested primer 2:ATGTGACAGTGCCTACCGTG