Insertion junction: CLIP2.056998_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.056998
Chromosome:chromosome 2
Location:1878050
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087551 (1 of 1) K17600 - vacuolar protein sorting-associated protein 54 (VPS54) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTTCATCAAATCCAACTTTGTTTCTTTCTGGGTAGAGTGCACCGACTG
Internal bar code:TAGATGCGAGGGTGAATAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2802
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CACAGGATGCAAACAACGCA
Suggested primer 2:AATTCTGGGCCAACGCTGTA