Insertion junction: CLIP2.057001_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057001
Chromosome:chromosome 11
Location:607315
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467609 (1 of 3) K10587 - ubiquitin-protein ligase E3 A (UBE3A, E6AP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTTGAAGGAGGACTTCCGGAAATGGAAACACGTGAGTCAGGAGGCA
Internal bar code:GTGGATTTCGGCGCTTTATCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1013
LEAP-Seq percent confirming:90.625
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGTTTTGTGGCGTC
Suggested primer 2:AAACTCACCTGTCTCAGCCG