Insertion junction: CLIP2.057002_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057002
Chromosome:chromosome 12
Location:3394974
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497900 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCTTGCCACCACCCTCACTAACGCCAGCATCACCGTTCCGAGCCCAAA
Internal bar code:CAGGTGTCCCGCTGTGTTCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1399
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TCATTCACAGCGTCCAGTCC
Suggested primer 2:CTTCGTACAGGAGGGGGAGA