Insertion junction: CLIP2.057007_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057007
Chromosome:plastome
Location:74326
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802293 orf202 Wendy transposon CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAGATTGACTACTATAAAAATCTAATGCAGTTGAATCAATTACATAAC
Internal bar code:TATGTGTTATACGACATAAAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:78.5714
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCTCCCTTTCACGGAG
Suggested primer 2:GCGGTGCAGCTTGTGTTTTA