Insertion junction: CLIP2.057014_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057014
Chromosome:chromosome 16
Location:2076361
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATAACAAATTTCCTACATCACAAGTCGCAAACCCGCGCAGCGCACCTG
Internal bar code:GTAGGAAAGGGTTCTGGAGAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:5258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCCGCAGTACTGTAAGCA
Suggested primer 2:ACTGCCCTTGCACCTCATAC