Insertion junction: CLIP2.057021_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057021
Chromosome:chromosome 6
Location:3864687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278183 (1 of 1) PTHR23054//PTHR23054:SF14 - UNCHARACTERIZED // PROTEIN Y45F10A.7, ISOFORM A 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGTCATGTTGGGCCCTGATAGCATGTGATGGCTCGGCGTCTTCGGGTG
Internal bar code:AGTCTCGTAGTCGGTAGGCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1257
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAACGCTCCTTCCATTCT
Suggested primer 2:TTCGAAAGCTCCGAGTTGCT