Insertion junction: CLIP2.057036_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057036
Chromosome:chromosome 10
Location:1508043
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre10.g428692 (1 of 1) IPR000945//IPR002110//IPR020683 - Dopamine beta-hydroxylase-related // Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCATACGTATACCTGGCTCTTCCGCTCCATCCATACCAACCCACGCAAA
Internal bar code:TGTTTTGATGTTCGTATGAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:343
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTTTCTCCCGACGACAG
Suggested primer 2:GGTGTGCTGTTGCGAAATGT