Insertion junction: CLIP2.057036_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057036
Chromosome:chromosome 12
Location:4245325
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g518107 (1 of 1) PF04182 - B-block binding subunit of TFIIIC (B-block_TFIIIC) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGGGGGCGGGGGCAGGTGCCGGCGCGGCGGCGGGGCCCGGGGCTGCGG
Internal bar code:AGTAGCTCTTAATCTCATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2475
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGCAAATCAGCCACGATG
Suggested primer 2:CATGAACACCACCACCACCA