Insertion junction: CLIP2.057042_6

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057042
Chromosome:chromosome 17
Location:1558682
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g707137 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGCATATGTGTACGTACGTCAGCCATGCGTACAGCTTCTTATCAACAC
Internal bar code:GTGCGACTATCTAGTGCTATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:595
LEAP-Seq percent confirming:12.5
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:AATTTGGTCGCGTTTGGGTG
Suggested primer 2:TCAGTCGTCTAGGTCCAGCA