Insertion junction: CLIP2.057053_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057053
Chromosome:chromosome 4
Location:3069764
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g225350 (1 of 3) IPR002483 - PWI domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAATTTTCCTGTGGCCGGCTGAGGGGCGGAAGTCCTCCCCGGTGGATTA
Internal bar code:TGGGTGATACACTGCGCAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:271
LEAP-Seq percent confirming:15.3846
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GGAATATCAACACGCGCACC
Suggested primer 2:AAGACAGGGGTTAAAGCGGG