Insertion junction: CLIP2.057059_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057059
Chromosome:chromosome 7
Location:1615055
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325250 (1 of 2) PF06977 - SdiA-regulated (SdiA-regulated) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTGCGGCGCCCTAATCCCTTCAACTCCCTTCAACCTAACCCCGCCCGC
Internal bar code:CAATTACGATTTGTCTCTATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:700
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGCCGGGTTGCAATGTC
Suggested primer 2:GATGTGGGTTAGCCAGCAGT