Insertion junction: CLIP2.057060_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057060
Chromosome:chromosome 2
Location:3976863
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102600 (1 of 1) PTHR23012:SF92 - RING/U-BOX DOMAIN-CONTAINING PROTEIN 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGTAAGGGCTGCGACAGCACACCCGTGTGTGACCACGGGCACACACAT
Internal bar code:TACTATGTTTTCAAACATTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:4228
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGCAAAAGACACACGG
Suggested primer 2:TATGTGTTGTCGGCAAGGCT