Insertion junction: CLIP2.057061_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057061
Chromosome:chromosome 6
Location:5027671
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281900 CrZIP7,ZIP7,ZIL2 (1 of 1) PTHR11040//PTHR11040:SF68 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED; Zinc/iron transporter gene_edge/mRNA_edge/3'UTR
Cre06.g281950 (1 of 16) PF07707 - BTB And C-terminal Kelch (BACK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGACCATGGAGTACTGAAACGTTCTTTAAAGGCGAGAGTTTCCACCTCT
Internal bar code:AGTTCGCTGGAGTAAGTCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1493
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACTGGTACGGCATGGAAGG
Suggested primer 2:TGGGTTGGTAGTTGTGGACG