Insertion junction: CLIP2.057061_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057061
Chromosome:chromosome 6
Location:5027694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g281900 CrZIP7,ZIP7,ZIL2 (1 of 1) PTHR11040//PTHR11040:SF68 - ZINC/IRON TRANSPORTER // SUBFAMILY NOT NAMED; Zinc/iron transporter gene_edge/mRNA_edge/3'UTR
Cre06.g281950 (1 of 16) PF07707 - BTB And C-terminal Kelch (BACK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCACTCAGTGGCCCGCAAGCGTGCCATTATGTGATCAAGTCATGCT
Internal bar code:AGTTCGCTGGAGTAAGTCTAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2156
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGTTGGTAGTTGTGGACG
Suggested primer 2:AACTGGTACGGCATGGAAGG