Insertion junction: CLIP2.057089_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057089
Chromosome:chromosome 10
Location:1015736
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g801111 (1 of 7) PF00628//PF00665 - PHD-finger (PHD) // Integrase core domain (rve) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGACTCGAAGCCAGCAATGAGGATTGACTAACCCAGTGACGTGAGACT
Internal bar code:AAGCTGTCCTTACCTCTCCCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1523
LEAP-Seq percent confirming:81.9672
LEAP-Seq n confirming:50
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCACACGCACTGAGTCA
Suggested primer 2:TCAGTTGTACGGGCAGTTCC