Insertion junction: CLIP2.057095_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057095
Chromosome:chromosome 15
Location:5683603
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g143307 CLPC1 (1 of 1) PTHR11638//PTHR11638:SF96 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED; ClpC chaperone, Hsp100 family intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGATTGACGAGGTGCACACGCTGATTGGCGCGGGCGCGGCGGAGGGCG
Internal bar code:CAGGCGTGTTCAGTGCCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:189
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAAGGTCTCCTCGATGGT
Suggested primer 2:TTGAGGAGCGGCTGAAGAAG