Insertion junction: CLIP2.057099_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.057099
Chromosome:plastome
Location:160027
Confidence (%):63
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGCTGAATATTTCCGTGATGTTAACAAACAAGACGTATTATTCTTCAT
Internal bar code:GGTGTTAAGGCTAGTTAGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:10.7143
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAAGAATCCACGGTTGT
Suggested primer 2:ATTCACCGTACAGCTCCTGC