Insertion junction: CLIP2.057102_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057102
Chromosome:chromosome 13
Location:4246757
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591951 3'UTR
Cre13.g592000 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGAGTAGTGGCTGTGAAACAATGAGCGTGGCTGTTGCTGGACGTTG
Internal bar code:ATACCTATCTTTCAATATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1683
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGTTACAAGGCGCGA
Suggested primer 2:GGTGAACTGGATGCTCAGCT