Insertion junction: CLIP2.057102_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057102
Chromosome:chromosome 13
Location:4246758
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591951 3'UTR
Cre13.g592000 (1 of 19) K08850 - aurora kinase, other [EC:2.7.11.1] (AURKX) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTCCAACCGAGCATGCGAGCGCCTGCGCCCGTGGCCGTCATTGCCAAGA
Internal bar code:ATACCTATCTTTCAATATATAG

Confirmation - LEAP-Seq

LEAP-Seq distance:5753
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGAACTGGATGCTCAGCT
Suggested primer 2:ATGAAGGTTACAAGGCGCGA