Insertion junction: CLIP2.057104_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057104
Chromosome:chromosome 3
Location:675490
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145767 RRP6,RRP6a putative exosome subunit; (1 of 1) K12951 - cation-transporting P-type ATPase D (ctpD) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGATATCATAATGAAGCATAGACAGCGTTTCTGCTCCTCCTGGCAACA
Internal bar code:TCTTGTTGACGAATTTTGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:830
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTCCGCAATGTCGTCCTC
Suggested primer 2:TACACCACTTGGAAGCCGTC