Insertion junction: CLIP2.057108_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.057108
Chromosome:chromosome 11
Location:667676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467616 Dyf-13,IFT56,Ttc26 (1 of 3) PF12895 - Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3); Intraflagellar Transport Protein 56 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGACCGAGGCTGGGTCCAGGCATCGTGTGCCAACGGCTGCAGACCTG
Internal bar code:AAACACCTAGCACACATAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2284
LEAP-Seq percent confirming:86.4583
LEAP-Seq n confirming:83
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:96

Suggested primers for confirmation by PCR

Suggested primer 1:TACTCGACCGTTATGAGCGC
Suggested primer 2:TCTTCAGGTCGTTCCGGTTG