Insertion junction: CLIP2.057117_3

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057117
Chromosome:chromosome 2
Location:4476108
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106450 LCA1 (1 of 1) PTHR11440//PTHR11440:SF4//PTHR23070//PTHR23070:SF14 - LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED // PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE // BCS1 AAA-TYPE ATPASE // SUBFAMILY NOT NAMED; AAA ATPase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGCTACACGTACACGCACGACAGCAGCACCGAGAAGCGCCGCCGCAT
Internal bar code:GTCATGATTTGACATTTCCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTGGGGACGTAGAGGTA
Suggested primer 2:GTGGTGTGCAAGCAGACAAG