Insertion junction: CLIP2.057133_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.057133
Chromosome:chromosome 13
Location:442125
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre13.g564850 (1 of 1) PTHR31651:SF3 - AUXIN EFFLUX CARRIER FAMILY PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACACACACACACACACACACACACACACACACACACACACACACA
Internal bar code:GTTGCGTTTACAAGCTCCCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1981
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCGTACATACACCCACAC
Suggested primer 2:CCACCTGGCCATGGAGTG