Insertion junction: CLIP2.057135_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057135
Chromosome:chromosome 12
Location:8824786
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546750 Putative peroxisomal membrane protein; (1 of 34) IPR000571 - Zinc finger, CCCH-type 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAATTGCCTTGCCCATGAGCCCTCAAGGCAGCGAAGCACATAATCGT
Internal bar code:TGCGTGGTCACAAATAAAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2520
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTTTTGTCACTGCAGGG
Suggested primer 2:CCTTATTGCGCAACGAGAGC