Insertion junction: CLIP2.057142_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057142
Chromosome:chromosome 17
Location:1070472
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703700 SCLB1,SCL2,SUCLA2 Succinate-CoA ligase beta chain; (1 of 1) K01900 - succinyl-CoA synthetase beta subunit (LSC2) 5'UTR
Cre17.g703750 (1 of 1) PF14222 - Cell morphogenesis N-terminal (MOR2-PAG1_N) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTAGGCGTGGTAATGGCAAGTTTCGGGGATGCATGCGACTTGAGCCAA
Internal bar code:ATGCGGCTTCGAGAGTAATGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:15.0685
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:62
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCTGCAGCACCTGTAA
Suggested primer 2:CAGCACTCTGACAGCCTGAA