Insertion junction: CLIP2.057144_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057144
Chromosome:chromosome 2
Location:6249189
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387150 HSF1 (1 of 1) PTHR10015:SF162 - HEAT STRESS TRANSCRIPTION FACTOR A-1A-RELATED; Heat shock transcription factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACTCACGCCGGTCAGACCCCATCCCCACACCTGGATCCTTGGCAA
Internal bar code:ATTCAGTCGAAAATCTAATCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:561
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACATGTAGGATGCGAGA
Suggested primer 2:CTCCGCGGGTATGTGTAGTC