Insertion junction: CLIP2.057145_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.057145
Chromosome:chromosome 10
Location:5731960
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459600 (1 of 1) K14832 - ribosome biogenesis protein MAK21 (MAK21, NOC1, CEBPZ) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGAGAATTACAAGCTTACCAGTTACCGCATTAGGACGCAGTAATAAGA
Internal bar code:GTGGTGATTAAATAACACTCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1290
LEAP-Seq percent confirming:86.7924
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGAGGAGGAGGATGTGG
Suggested primer 2:AGGAAGTGCGTGTTAGCGAA