Insertion junction: CLIP2.057157_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057157
Chromosome:chromosome 17
Location:3564727
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g724900 3'UTR
Cre17.g724950 (1 of 1) PTHR16161:SF0 - TRANSCRIPTIONAL PROTEIN SWT1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTGTTGTAGGGCTTCGCGTTCAAGTATGAACCCGTCCAGGTGGCGTAGT
Internal bar code:GATTTTGAGGGTTTTCGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1945
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAGCAGAGAGACCGATT
Suggested primer 2:GGCAACACTAGGGTCAAGCT