Insertion junction: CLIP2.057162_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.057162
Chromosome:chromosome 10
Location:783295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g422900 (1 of 10) PTHR23257:SF520 - IP11267P 5'UTR
lncRNA_TCONS_00061706 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGCCCACAACGTCGCCTTCTCAACGATTGTCCGTGTGCAATGTGCTC
Internal bar code:GCCTCGTGTCAGGTGGTCCATC

Confirmation - LEAP-Seq

LEAP-Seq distance:3155
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGGCTGTGGTTACCT
Suggested primer 2:GACTACTGGTCGCGGATCTG