Insertion junction: CLIP2.057167_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057167
Chromosome:chromosome 1
Location:7916609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055469 (1 of 2) IPR007213//IPR011610//IPR029063 - Leucine carboxyl methyltransferase // S-adenosyl-L-methionine-dependent methyltransferase, putative // S-adenosyl-L-methionine-dependent methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACGCGATGACTGACTGACGGGCAGCTACTGGGTGTAAGGGGGGGAGG
Internal bar code:AGAGGCCTGACCCTTTTCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1346
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTGACTGTTGTGCGTGGG
Suggested primer 2:GTTGTGGTGCGGTGAGTTTC