Insertion junction: CLIP2.057175_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.057175
Chromosome:chromosome 16
Location:7704979
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g686286 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATGGGATTGTAGGGAACCGGGACCCTGGAGGTGGACGTGCGGAACGGGT
Internal bar code:TGGATCGTGGGTGAGTCCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:619
LEAP-Seq percent confirming:31.5789
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGCGCGTCTGTGTCAAG
Suggested primer 2:TCCAAGTACAAGCTGCCAGG