Insertion junction: CLIP2.057179_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.057179
Chromosome:chromosome 2
Location:1576844
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g084850 (1 of 4) IPR001810//IPR020683 - F-box domain // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGTAACGGCCTGCCGTTATCGGCGGCCCAGAGCTGGCAGGATGATG
Internal bar code:TTGTTCGTATTGCAGATCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGGAGAGCAGTCGGTGTT
Suggested primer 2:CCGTTGCATTACGCTAGTGC