Insertion junction: CLIP2.057187_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.057187
Chromosome:chromosome 12
Location:5964248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533950 COT1 Cobalt transport protein; (1 of 1) PTHR33514//PTHR33514:SF3 - FAMILY NOT NAMED // PROTEIN ABCI12, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGATTTGTGCCGCAAAGGAGCGTCCATTGACGGCAGTGCAATTGTGCA
Internal bar code:TGTGTCGGATCACCATAGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1829
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGGTTGAGTGGTTGTGT
Suggested primer 2:TAGGCTATGACGCAGCATGG